miRBase entry: pol-mir-10b

Stem-loop pol-mir-10b


Accession
MI0022194
Description
Paralichthys olivaceus pol-mir-10b precursor miRNA

Literature search
1 open access papers mention pol-mir-10b
(2 sentences)

Sequence

UACCCUGUAGAACCGAAUGUGUgugaugcaaccacagucacAGAUUCGAUUCUAGGGGAGUAU
((((((.(((((.(((((.((((...((......))..)))).))))).))))).))).))).

Structure
-   -   G     C     G    uga  ca 
 UAC CCU UAGAA CGAAU UGUg   ug  a
 ||| ||| ||||| ||||| ||||   ||   
 AUG GGG AUCUU GCUUA Acac   ac  c
U   A   G     A     G    -ug  ac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pol-miR-10b-5p

Accession MIMAT0025422
Description Paralichthys olivaceus pol-miR-10b-5p mature miRNA
Sequence 1 - UACCCUGUAGAACCGAAUGUGU - 22
Evidence experimental
Illumina [1]

Mature pol-miR-10b-3p

Accession MIMAT0025423
Description Paralichthys olivaceus pol-miR-10b-3p mature miRNA
Sequence 42 - AGAUUCGAUUCUAGGGGAGUAU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21818405
    Identification and differential expression of microRNAs during metamorphosis of the Japanese flounder (Paralichthys olivaceus)
    Fu Y, Shi Z, Wu M, Zhang J, Jia L, Chen X
    PLoS One (2011) 6:e22957