Stem-loop pol-mir-199a-1

Accession

MI0022203

Description

Paralichthys olivaceus pol-mir-199a-1 precursor miRNA

Literature search

2 open access papers mention pol-mir-199a-1
(2 sentences)

Sequence

CCCAGUGUUCAGACUACCUGUUcauugucauacugguguACAGUAGUCUGCACAUUGGUUA
.(((((((.((((((((.(((.((((........)))).))))))))))).)))))))...

Structure

--C       U        C   U    guc 
   CCAGUGU CAGACUAC UGU cauu   a
   ||||||| |||||||| ||| ||||    
   GGUUACA GUCUGAUG ACA gugg   u
AUU       C        -   u    uca 

Annotation confidence Not enough data

Genome context

Unknown

Mature pol-miR-199a-5p

• Accession: MIMAT0025440
• Description: Paralichthys olivaceus pol-miR-199a-5p mature miRNA
• Sequence: 1 - CCCAGUGUUCAGACUACCUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature pol-miR-199a-3p

• Accession: MIMAT0025441
• Description: Paralichthys olivaceus pol-miR-199a-3p mature miRNA
• Sequence: 40 - ACAGUAGUCUGCACAUUGGUUA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21818405
   Identification and differential expression of microRNAs during metamorphosis of the Japanese flounder (Paralichthys olivaceus)
   Fu Y, Shi Z, Wu M, Zhang J, Jia L, Chen X
   PLoS One (2011) 6:e22957