Stem-loop hci-MIR156a

Accession

MI0022230

Description

Helianthus ciliaris hci-MIR156a precursor miRNA

Gene family

MIPF0000008; MIR156

Sequence

aaagaggguuugguugagaacUGACAGAAGAGAGUGAGUACacgcaggcaauuguauaguggacuauacucuuguuugaguuaugcgugugcucacuucucuuccgucagcccuugcucuuuuuuuucuc
(((((((((......(((..(((((.(((((((((((((((((((((((((..((((((....))))))..))))).......))))))))))))).))))))).)))))..))))))))))))......

Structure

------         uugguu   aa     A       -             -------     uu      u 
      aaagagggu      gag  cUGAC GAAGAGA GUGAGUACacgca       ggcaa  guauag g
      |||||||||      |||  ||||| ||||||| |||||||||||||       |||||  ||||||  
      uuuuucucg      uuc  gacug cuucucu cacucgugugcgu       uuguu  cauauc g
cucuuu         ------   cc     c       u             auugagu     cu      a 

Annotation confidence Not enough data

Genome context

Unknown

Mature hci-miR156a

• Accession: MIMAT0025490
• Description: Helianthus ciliaris hci-miR156a mature miRNA
• Sequence: 22 - UGACAGAAGAGAGUGAGUAC - 41
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532