miRBase entry: htu-MIR160a

Stem-loop htu-MIR160a


Accession
MI0022239
Description
Helianthus tuberosus htu-MIR160a precursor miRNA
Gene family
MIPF0000032; MIR160


Sequence

gcaUGCCUGGCUCCCUGUAUGCCuccugcaggaaaacaacugcuggggguaugaggguugacugaaaaggacgguggaagggcaaaaccgucu
............((((.(((((((((.((((........)))).)))))))))))))...........(((((((...........)))))))

Structure
------------------------gcaUGCCUGGCU    G         u    gaa 
                                    CCCU UAUGCCucc gcag   a
                                    |||| ||||||||| ||||    
                                    ggga guauggggg cguc   a
ucugccaaaacgggaagguggcaggaaaagucaguu    -         u    aac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature htu-miR160a

Accession MIMAT0025499
Description Helianthus tuberosus htu-miR160a mature miRNA
Sequence 4 - UGCCUGGCUCCCUGUAUGCC - 23
Evidence not_experimental

References

  1. PubMed ID: 21670966
    Identification of MicroRNAs and their targets in Helianthus
    "Barozai MY, Baloch IA, Din M"
    "Mol Biol Rep (2012) 39:2523-2532