miRBase entry: bta-mir-3154

Stem-loop bta-mir-3154


Accession
MI0022269
Description
Bos taurus bta-mir-3154 precursor miRNA


Sequence

528 reads, 1.0 reads per million, 129 experiments
aggccccuccuucccagccacagcuccugcucgccccugccacgucaaaagaggCAGAAGGGGAGUCGGAGCAGAaaggggaccc
.(((((((..(((.........(((((.((((.((((((((.(.......).)))))..))))))).))))).)))))))).)).

Structure
a  -     cc   ccagccaca     u    g   --     a gu 
 gg ccccu  uuc         gcucc gcuc ccc  cugcc c  c
 || |||||  |||         ||||| |||| |||  ||||| |  a
 cc gggga  aAG         CGAGG UGAG GGG  GACgg g  a
c  a     --   --------A     C    -   AA     a aa 


Annotation confidence Not enough data
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Genome context
11: 98855939-98856023 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from bta-mir-3154
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-3154-3p

Accession MIMAT0025529
Description Bos taurus bta-miR-3154-3p mature miRNA
Sequence 55 - CAGAAGGGGAGUCGGAGCAGA - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026