Stem-loop bta-mir-2285o-1

Accession

MI0022270

Description

Bos taurus bta-mir-2285o-1 precursor miRNA

Gene family

MIPF0000747; mir-2284

Literature search

11 open access papers mention bta-mir-2285o-1
(16 sentences)

Sequence

5077 reads, 6 reads per million, 62 experiments

auaggauuggccaaagaguucauuuggguuuuucuagugagcuguaaacaaaAAACCCGAACGAACUUUUGGcugacucaau
....((((((((((.((((((.(((((((((((...((.........)).))))))))))).)))))))))))))).))...

Structure

auag  -        a      a           cua  gag 
    ga uuggccaa gaguuc uuuggguuuuu   gu   c
    || |||||||| |||||| |||||||||||   ||   u
    cu agucGGUU UUCAAG AAGCCCAAAaa   ca   g
-uaa  c        -      C           --a  aau 

Annotation confidence Not enough data

Genome context

chr12: 16589906-16589987 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2285o-1

Mature bta-miR-2285o

• Accession: MIMAT0025530
• Description: Bos taurus bta-miR-2285o mature miRNA
• Sequence: 53 - AAACCCGAACGAACUUUUGG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026