Stem-loop bta-mir-2285p

Accession

MI0022274

Description

Bos taurus bta-mir-2285p precursor miRNA

Literature search

11 open access papers mention bta-mir-2285p
(15 sentences)

Sequence

170650 reads, 35.0 reads per million, 280 experiments

acuggguuggccaAAUUGUUCAUUUGGGUUUUUCcguaacaucuuauggAAAAACUUGAGUGAACUUUUGGgucagcccag
.(((((((((((.((..((((((((((((((((((((((....))))))))))))))))))))))..)).)))))))))))

Structure

a           a  UU                      c 
 cuggguuggcc AA  GUUCAUUUGGGUUUUUCcguaa a
 ||||||||||| ||  ||||||||||||||||||||||  
 gacccgacugG UU  CAAGUGAGUUCAAAAAgguauu u
-           G  UU                      c 

Annotation confidence High

Genome context

13: 36354840-36354920 [+]

Mature bta-miR-2285p-3p

• Accession: MIMAT0025532
• Description: Bos taurus bta-miR-2285p-3p mature miRNA
• Sequence: 50 - AAAAACUUGAGUGAACUUUUGG - 71
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-2285p-5p

• Accession: MIMAT0061049
• Description: Bos taurus bta-miR-2285p-5p mature miRNA
• Sequence: 14 - AAUUGUUCAUUUGGGUUUUUC - 34
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-2285p-3p

• Accession: MIMAT0025532
• Description: Bos taurus bta-miR-2285p-3p mature miRNA
• Sequence: 50 - AAAAACUUGAGUGAACUUUUGG - 71
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026


2. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103