Stem-loop bta-mir-6518

Accession

MI0022280

Description

Bos taurus bta-mir-6518 precursor miRNA

Sequence

2443 reads, 2.0 reads per million, 262 experiments

cugagggucucagcauuuauuUCGCAGUUUCUCCUCUCCGUGAGcgucugccaggcUCACGGAGAGGAGAAACUGCACcuggccccaa
.((.(((((..............((((((((((((((((((((((.........))))))))))))))))))))))....))))))).

Structure

c  a     ucagcauuuauuUC                      guc 
 ug ggguc              GCAGUUUCUCCUCUCCGUGAGc   u
 || |||||              ||||||||||||||||||||||   g
 ac cccgg              CGUCAAAGAGGAGAGGCACUcg   c
a  -     ----------ucCA                      gac 

Annotation confidence Medium

Genome context

15: 42378016-42378103 [+]

Mature bta-miR-6518-5p

• Accession: MIMAT0050999
• Description: Bos taurus bta-miR-6518-5p mature miRNA
• Sequence: 22 - UCGCAGUUUCUCCUCUCCGUGAG - 44
• Evidence: experimental ; Illumina [1]

Mature bta-miR-6518-3p

• Accession: MIMAT0025536
• Description: Bos taurus bta-miR-6518-3p mature miRNA
• Sequence: 57 - UCACGGAGAGGAGAAACUGCAC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026