miRBase entry: bta-mir-6520

Stem-loop bta-mir-6520


Accession
MI0022282
Description
Bos taurus bta-mir-6520 precursor miRNA


Sequence

10410 reads, 4.0 reads per million, 295 experiments
gucccucuccUUGAGUAUUGUCAGAGAGAGCgauucugugcccacccugaguCGUCUCUCCGCCUGUACUCAGccagcagcgcc
....((((..((((((((.(.(.((((((.((((((............)))))))))))).).).))))))))..)).))....

Structure
gucc  -  cc        U U A      G      ugugc 
    cu cu  UUGAGUAU G C GAGAGA Cgauuc     c
    || ||  |||||||| | | |||||| ||||||      
    ga ga  GACUCAUG C G CUCUCU GCugag     c
ccgc  c  cc        U C C      -      uccca 


Annotation confidence High
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Genome context
17: 45096739-45096822 [-]

Database links

Mature bta-miR-6520-5p

Accession MIMAT0025538
Description Bos taurus bta-miR-6520-5p mature miRNA
Sequence 11 - UUGAGUAUUGUCAGAGAGAGC - 31
Evidence experimental
Illumina [1]

Mature bta-miR-6520-3p

Accession MIMAT0051000
Description Bos taurus bta-miR-6520-3p mature miRNA
Sequence 53 - CGUCUCUCCGCCUGUACUCAG - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026