Stem-loop bta-mir-376e

Accession

MI0022290

Description

Bos taurus bta-mir-376e precursor miRNA

Literature search

1 open access papers mention bta-mir-376e
(1 sentences)

Sequence

192589 reads, 53.0 reads per million, 296 experiments

ugauauucaaaaGGUGGAUAUUCCUUCUAUGUUUacaggauugacagcuaAACAUAGAGGAAAAUCCACAUUUuaaguaucu
.((((((.((((.((((((.(((((.((((((((((.(......).).)))))))))))))).)))))).)))).)))))).

Structure

u      c    G      A     U         - a ga 
 gauauu aaaa GUGGAU UUCCU CUAUGUUUa c g  u
 |||||| |||| |||||| ||||| ||||||||| | |   
 cuauga uUUU CACCUA AAGGA GAUACAAau g c  u
u      a    A      A     -         c a ag 

Annotation confidence High

Genome context

21: 65928577-65928658 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from bta-mir-376e

Mature bta-miR-376e-5p

• Accession: MIMAT0061051
• Description: Bos taurus bta-miR-376e-5p mature miRNA
• Sequence: 13 - GGUGGAUAUUCCUUCUAUGUUU - 34
• Evidence: experimental ; Illumina [1]

Mature bta-miR-376e-3p

• Accession: MIMAT0025543
• Description: Bos taurus bta-miR-376e-3p mature miRNA
• Sequence: 51 - AACAUAGAGGAAAAUCCACAUUU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026