Stem-loop bta-mir-411c

Accession

MI0022292

Description

Bos taurus bta-mir-411c precursor miRNA

Literature search

1 open access papers mention bta-mir-411c
(1 sentences)

Sequence

4532 reads, 46 reads per million, 63 experiments

gggaguggauGGUUGAUCAGAGAACAUACAUUuugucaaugaUGUAUGUCAACUGAUCCACAGUcccucccuau
(((((.((((.((.((((((...(((((((((........)))))))))...)))))).)).)))))))))...

Structure

---     u    G  U      AGA         uug 
   gggag ggau GU GAUCAG   ACAUACAUU   u
   ||||| |||| || ||||||   |||||||||    
   cccuc ccUG CA CUAGUC   UGUAUGUag   c
uau     -    A  C      AAC         uaa 

Annotation confidence High

Genome context

chr21: 67867851-67867924 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from bta-mir-411c

Mature bta-miR-411c-5p

• Accession: MIMAT0025545
• Description: Bos taurus bta-miR-411c-5p mature miRNA
• Sequence: 11 - GGUUGAUCAGAGAACAUACAUU - 32
• Evidence: experimental ; Illumina [1]

Mature bta-miR-411c-3p

• Accession: MIMAT0025546
• Description: Bos taurus bta-miR-411c-3p mature miRNA
• Sequence: 43 - UGUAUGUCAACUGAUCCACAGU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026