Stem-loop bta-mir-2284y-4

Accession

MI0022300

Description

Bos taurus bta-mir-2284y-4 precursor miRNA

Gene family

MIPF0000747; mir-2284

Literature search

13 open access papers mention bta-mir-2284y-4
(33 sentences)

Sequence

5443 reads, 268 reads per million, 68 experiments

aggugggcccAAAAGUUCGUUCGGGUUUUUCcauaccaucuuacagaaaaacccaaacaaauuuuuuggcccaccua
(((((((((.(((((((.(((.(((((((((..((......))..))))))))).))).))))))).))))))))).

Structure

-         c       C   C         ca  cc 
 aggugggcc AAAAGUU GUU GGGUUUUUC  ua  a
 ||||||||| ||||||| ||| |||||||||  ||   
 uccacccgg uuuuuaa caa cccaaaaag  au  u
a         u       a   a         ac  uc 

Annotation confidence Not enough data

Genome context

chr24: 33986933-33987009 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2284y-4

Mature bta-miR-2284y

• Accession: MIMAT0024579
• Description: Bos taurus bta-miR-2284y mature miRNA
• Sequence: 11 - AAAAGUUCGUUCGGGUUUUUC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026