Stem-loop bta-mir-6523a

Accession

MI0022301

Description

Bos taurus bta-mir-6523a precursor miRNA

Sequence

25315 reads, 8.0 reads per million, 302 experiments

acucugaacuUCUGGGGUAACUUUGAGCAGGGgaugaauuguauuucaUACCCUGCUCUAGUGUCCCCAGUggggcagagua
((((((..((.((((((..(((..((((((((..((((......))))..)))))))).)))..)))))).))..)))))).

Structure

-      aa  U      UA   UU        ga    uu 
 acucug  cu CUGGGG  ACU  GAGCAGGG  ugaa  g
 ||||||  || ||||||  |||  ||||||||  ||||   
 ugagac  gg GACCCC  UGA  CUCGUCCC  acuu  u
a      gg  U      UG   -U        AU    ua 

Annotation confidence Medium

Genome context

24: 45690118-45690199 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-6523a

Mature bta-miR-6523a-5p

• Accession: MIMAT0025552
• Description: Bos taurus bta-miR-6523a-5p mature miRNA
• Sequence: 11 - UCUGGGGUAACUUUGAGCAGGG - 32
• Evidence: experimental ; Illumina [1]

Mature bta-miR-6523a-3p

• Accession: MIMAT0051011
• Description: Bos taurus bta-miR-6523a-3p mature miRNA
• Sequence: 49 - UACCCUGCUCUAGUGUCCCCAGU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026