Stem-loop bta-mir-6525

Accession

MI0022304

Description

Bos taurus bta-mir-6525 precursor miRNA

Literature search

2 open access papers mention bta-mir-6525
(9 sentences)

Sequence

5084 reads, 2.0 reads per million, 246 experiments

ggccggggagCUGGGGAAAGCAGGAGUGAGGGUcugcaccccaguaagCCUCGUUCUGCUUUCCCCACAGgcaccccucaugccc
(((.((((.((((((((((((((((.(((((.(.(((......)))).))))))))))))))))))...))).))))....))).

Structure

-   ---c    a   ---             G     G c   ac 
 ggc    gggg gCU   GGGGAAAGCAGGA UGAGG U ugc  c
 |||    |||| |||   ||||||||||||| ||||| | |||   
 ccg    cccc cgG   CCCCUUUCGUCUU GCUCC a aug  c
c   uacu    a   ACA             -     g -   ac 

Annotation confidence Medium

Genome context

4: 113652702-113652786 [-]

Mature bta-miR-6525-5p

• Accession: MIMAT0025554
• Description: Bos taurus bta-miR-6525-5p mature miRNA
• Sequence: 11 - CUGGGGAAAGCAGGAGUGAGGGU - 33
• Evidence: experimental ; Illumina [1]

Mature bta-miR-6525-3p

• Accession: MIMAT0051013
• Description: Bos taurus bta-miR-6525-3p mature miRNA
• Sequence: 49 - CCUCGUUCUGCUUUCCCCACAG - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026