Stem-loop bta-mir-2285o-5

Accession

MI0022307

Description

Bos taurus bta-mir-2285o-5 precursor miRNA

Literature search

11 open access papers mention bta-mir-2285o-5
(15 sentences)

Sequence

20055 reads, 11.0 reads per million, 303 experiments

auuguguuggucaaaagcUCAUUGGGGUUUUUCCgucacauacaggAAACCCGAACGAACUUUUGGgccaacccaa
.(((.((((((((((((.((.((.(((((..(((..........)))))))).)).)).))))).))))))).)))

Structure

a   u       -     c  A  G     UU   guca 
 uug guugguc aaaag UC UU GGGUU  UCC    c
 ||| ||||||| ||||| || || |||||  |||     
 aac caaccgG UUUUC AG AA CCCAA  Agg    a
-   c       G     A  C  G     --   acau 

Annotation confidence Medium

Genome context

5: 117234119-117234194 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2285o-5

Mature bta-miR-2285o-5-5p

• Accession: MIMAT0050987
• Description: Bos taurus bta-miR-2285o-5-5p mature miRNA
• Sequence: 19 - UCAUUGGGGUUUUUCC - 34
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285o-4-3p

• Accession: MIMAT0060780
• Description: Bos taurus bta-miR-2285o-4-3p mature miRNA
• Sequence: 47 - AAACCCGAACGAACUUUUGG - 66
• Evidence: experimental

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026