Stem-loop bta-mir-2285o-5

Accession

MI0022307

Description

Bos taurus bta-mir-2285o-5 precursor miRNA

Gene family

MIPF0000747; mir-2284

Literature search

11 open access papers mention bta-mir-2285o-5
(16 sentences)

Sequence

4655 reads, 14 reads per million, 59 experiments

auuguguuggucaaaagcucauugggguuuuuccgucacauacaggAAACCCGAACGAACUUUUGGgccaacccaa
.(((.((((((((((((.((.((.(((((..(((..........)))))))).)).)).))))).))))))).)))

Structure

a   u       -     c  a  g     uu   guca 
 uug guugguc aaaag uc uu ggguu  ucc    c
 ||| ||||||| ||||| || || |||||  |||     
 aac caaccgG UUUUC AG AA CCCAA  Agg    a
-   c       G     A  C  G     --   acau 

Annotation confidence Not enough data

Genome context

chr5: 118691013-118691088 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2285o-5

Mature bta-miR-2285o

• Accession: MIMAT0025530
• Description: Bos taurus bta-miR-2285o mature miRNA
• Sequence: 47 - AAACCCGAACGAACUUUUGG - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026