Stem-loop bta-mir-2285n-5

Accession

MI0022310

Description

Bos taurus bta-mir-2285n-5 precursor miRNA

Literature search

11 open access papers mention bta-mir-2285n-5
(15 sentences)

Sequence

11460 reads, 4.0 reads per million, 237 experiments

uuggauuuggccCAAAAAGUUCAUUUGAGUUUUuccuaagagcauauggAAAAACCCGAAUGAACUUUUGGgccaauccag
.((((((.(((((((((.(((((((((.((((((((...........)))))))).)))))))))))))))))))))))).

Structure

u      u         A         A        uaag 
 uggauu ggccCAAAA GUUCAUUUG GUUUUucc    a
 |||||| ||||||||| ||||||||| ||||||||    g
 accuaa ccgGGUUUU CAAGUAAGC CAAAAAgg    c
g      -         -         C        uaua 

Annotation confidence High

Genome context

8: 100510617-100510697 [-]

Mature bta-miR-2285n-5-5p

• Accession: MIMAT0050992
• Description: Bos taurus bta-miR-2285n-5-5p mature miRNA
• Sequence: 13 - CAAAAAGUUCAUUUGAGUUUU - 33
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285n-3p

• Accession: MIMAT0025531
• Description: Bos taurus bta-miR-2285n-3p mature miRNA
• Sequence: 50 - AAAAACCCGAAUGAACUUUUGG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026