Stem-loop bta-mir-6529a

Accession

MI0022328

Description

Bos taurus bta-mir-6529a precursor miRNA mir-6529

Gene
family

RF04090; mir-6529

Literature search

4 open access papers mention bta-mir-6529a
(6 sentences)

Sequence

264541 reads, 327.0 reads per million, 320 experiments

cuguucucuuGAGAGAUCAGAGGCGCAGAGUGcgucaaugucaaugaagCCUGUGCCUUUUACCUCUUUAAgagcgcac
.(((.((((((((((...((((((((((...((.(((.......))).))))))))))))...))).))))))).))).

Structure

c   u       -   AUC          AGU  g   au 
 ugu cucuuGA GAG   AGAGGCGCAG   Gc uca  g
 ||| ||||||| |||   ||||||||||   || |||  u
 acg gagAAUU CUC   UUUCCGUGUC   Cg agu  c
c   c       U   CAU          ---  a   aa 

Annotation confidence High

Genome context

1: 64851604-64851682 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-6529a

Mature bta-miR-6529a-5p

• Accession: MIMAT0025565
• Description: Bos taurus bta-miR-6529a-5p mature miRNA
• Sequence: 11 - GAGAGAUCAGAGGCGCAGAGUG - 32
• Evidence: experimental ; Illumina [1]

Mature bta-miR-6529a-3p

• Accession: MIMAT0061054
• Description: Bos taurus bta-miR-6529a-3p mature miRNA
• Sequence: 50 - CCUGUGCCUUUUACCUCUUUAA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026