Stem-loop bta-mir-2284z-5

Accession

MI0022338

Description

Bos taurus bta-mir-2284z-5 precursor miRNA

Gene family

MIPF0000747; mir-2284

Literature search

13 open access papers mention bta-mir-2284z-5
(32 sentences)

Sequence

3250 reads, 74 reads per million, 72 experiments

uuggguuggcAAAAAAGUUUGUUUGGGUUUUUucauaacauuuaauggaaaacccaaacaaacauuuaggccaacccaau
((((((((((..(((.((((((((((((((((.(((........))))))))))))))))))).)))..)))))))))).

Structure

-          AA   A                u   aac 
 uuggguuggc  AAA GUUUGUUUGGGUUUUU cau   a
 ||||||||||  ||| |||||||||||||||| |||    
 aacccaaccg  uuu caaacaaacccaaaag gua   u
u          ga   a                -   auu 

Annotation confidence Not enough data

Genome context

chr5: 43348101-43348180 [+]

Mature bta-miR-2284z

• Accession: MIMAT0025559
• Description: Bos taurus bta-miR-2284z mature miRNA
• Sequence: 11 - AAAAAAGUUUGUUUGGGUUUUU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026


2. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103