Stem-loop bta-mir-2284z-5

Accession

MI0022338

Description

Bos taurus bta-mir-2284z-5 precursor miRNA

Literature search

13 open access papers mention bta-mir-2284z-5
(33 sentences)

Sequence

54560 reads, 59.0 reads per million, 300 experiments

uuggguuggcAAAAAAGUUUGUUUGGGUUUUUucauaacauuuaauggAAAACCCAAACAAACAUUUaggccaacccaau
((((((((((..(((.((((((((((((((((.(((........))))))))))))))))))).)))..)))))))))).

Structure

-          AA   A                u   aac 
 uuggguuggc  AAA GUUUGUUUGGGUUUUU cau   a
 ||||||||||  ||| |||||||||||||||| |||    
 aacccaaccg  UUU CAAACAAACCCAAAAg gua   u
u          ga   A                -   auu 

Annotation confidence Medium

Genome context

5: 43005189-43005268 [+]

Mature bta-miR-2284z-5p

• Accession: MIMAT0025559
• Description: Bos taurus bta-miR-2284z-5p mature miRNA
• Sequence: 11 - AAAAAAGUUUGUUUGGGUUUUU - 32
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2284z-5-3p

• Accession: MIMAT0051017
• Description: Bos taurus bta-miR-2284z-5-3p mature miRNA
• Sequence: 49 - AAAACCCAAACAAACAUUU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026


2. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103