Stem-loop bta-mir-2284z-6

Accession

MI0022339

Description

Bos taurus bta-mir-2284z-6 precursor miRNA

Literature search

13 open access papers mention bta-mir-2284z-6
(33 sentences)

Sequence

40839 reads, 37.0 reads per million, 302 experiments

uggguuguucAAAAAAGUUUGUUUGGGUUUUUccguaagauauuacagagaaauccAAACGAACUUUUUGGCCAACucaa
(((((((.(((((((.(((((((((((((((((.((((....)))).)))))))))))))))))))))))).))))))).

Structure

-       u       A                 c    g 
 uggguug ucAAAAA GUUUGUUUGGGUUUUUc guaa a
 ||||||| ||||||| ||||||||||||||||| ||||  
 acuCAAC GGUUUUU CAAGCAAAccuaaagag cauu u
a       C       -                 a    a 

Annotation confidence Medium

Genome context

5: 90832752-90832831 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2284z-6

Mature bta-miR-2284z-5p

• Accession: MIMAT0025559
• Description: Bos taurus bta-miR-2284z-5p mature miRNA
• Sequence: 11 - AAAAAAGUUUGUUUGGGUUUUU - 32
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2284z-6-3p

• Accession: MIMAT0051018
• Description: Bos taurus bta-miR-2284z-6-3p mature miRNA
• Sequence: 57 - AAACGAACUUUUUGGCCAAC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026