Stem-loop bta-mir-6535

Accession

MI0022340

Description

Bos taurus bta-mir-6535 precursor miRNA

Sequence

437 reads, 1.0 reads per million, 151 experiments

gcccugggguUAGGGGGAGCGGUUGGAGGACUgggggcucagCCUUCCUACCUCUCUCCGUAGgagccuggug
(((..((..(((.((((((.(((.(((((.((((....)))).))))).))).)))))).)))...)).))).

Structure

-   cu  -gg   G      C   U     A    g 
 gcc  gg   uUA GGGGAG GGU GGAGG CUgg g
 |||  ||   ||| |||||| ||| ||||| ||||  
 ugg  cc   GAU CCUCUC CCA CCUUC gacu g
g   -u  gag   G      U   U     C    c 

Annotation confidence High

Genome context

7: 17755619-17755691 [-]

Mature bta-miR-6535-5p

• Accession: MIMAT0025571
• Description: Bos taurus bta-miR-6535-5p mature miRNA
• Sequence: 11 - UAGGGGGAGCGGUUGGAGGACU - 32
• Evidence: experimental ; Illumina [1]

Mature bta-miR-6535-3p

• Accession: MIMAT0051031
• Description: Bos taurus bta-miR-6535-3p mature miRNA
• Sequence: 43 - CCUUCCUACCUCUCUCCGUAG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026