Stem-loop bta-mir-2285q

Accession

MI0022345

Description

Bos taurus bta-mir-2285q precursor miRNA

Literature search

11 open access papers mention bta-mir-2285q
(15 sentences)

Sequence

4783 reads, 30 reads per million, 73 experiments

aaauguuguuggccaaaaaguucauucagguuuucuguaagauguuagggAAGGACCUGAAUGAACUUUCUGGccaacacauu
.(((((.((((((((.((((((((((((((((((((.(((....))).)))).)))))))))))))))).)))))))))))))

Structure

a     u        a                -    g   g 
 aaugu guuggcca aaaguucauucagguu uucu uaa a
 ||||| |||||||| |||||||||||||||| |||| |||  
 uuaca caaccGGU UUUCAAGUAAGUCCAG AAgg auu u
-     -        C                G    g   g 

Annotation confidence Not enough data

Genome context

chr20: 13481349-13481431 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2285q

Mature bta-miR-2285q

• Accession: MIMAT0025574
• Description: Bos taurus bta-miR-2285q mature miRNA
• Sequence: 51 - AAGGACCUGAAUGAACUUUCUGG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026