miRBase entry: bta-mir-2285q

Stem-loop bta-mir-2285q


Accession
MI0022345
Description
Bos taurus bta-mir-2285q precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285q
(15 sentences)

Sequence

4783 reads, 30 reads per million, 73 experiments
aaauguuguuggccaaaaaguucauucagguuuucuguaagauguuagggAAGGACCUGAAUGAACUUUCUGGccaacacauu
.(((((.((((((((.((((((((((((((((((((.(((....))).)))).)))))))))))))))).)))))))))))))

Structure
a     u        a                -    g   g 
 aaugu guuggcca aaaguucauucagguu uucu uaa a
 ||||| |||||||| |||||||||||||||| |||| |||  
 uuaca caaccGGU UUUCAAGUAAGUCCAG AAgg auu u
-     -        C                G    g   g 


Annotation confidence Not enough data
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Genome context
chr20: 13481349-13481431 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-2285q
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-2285q

Accession MIMAT0025574
Description Bos taurus bta-miR-2285q mature miRNA
Sequence 51 - AAGGACCUGAAUGAACUUUCUGG - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026