Stem-loop bta-mir-2285q

Accession

MI0022345

Description

Bos taurus bta-mir-2285q precursor miRNA

Literature search

11 open access papers mention bta-mir-2285q
(15 sentences)

Sequence

302058 reads, 72.0 reads per million, 320 experiments

aaauguuguuggCCAAAAAGUUCAUUCAGGUUUUcuguaagauguuagggAAGGACCUGAAUGAACUUUCUGGccaacacauu
.(((((.((((((((.((((((((((((((((((((.(((....))).)))).)))))))))))))))).)))))))))))))

Structure

a     u        A                -    g   g 
 aaugu guuggCCA AAAGUUCAUUCAGGUU UUcu uaa a
 ||||| |||||||| |||||||||||||||| |||| |||  
 uuaca caaccGGU UUUCAAGUAAGUCCAG AAgg auu u
-     -        C                G    g   g 

Annotation confidence High

Genome context

20: 13456019-13456101 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2285q

Mature bta-miR-2285q-5p

• Accession: MIMAT0051033
• Description: Bos taurus bta-miR-2285q-5p mature miRNA
• Sequence: 13 - CCAAAAAGUUCAUUCAGGUUUU - 34
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285q-3p

• Accession: MIMAT0025574
• Description: Bos taurus bta-miR-2285q-3p mature miRNA
• Sequence: 51 - AAGGACCUGAAUGAACUUUCUGG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026