miRBase entry: bta-mir-2285v

Stem-loop bta-mir-2285v


Accession
MI0022350
Description
Bos taurus bta-mir-2285v precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
12 open access papers mention bta-mir-2285v
(16 sentences)

Sequence

207 reads, 15 reads per million, 22 experiments
auuggguuggccagaaaguucauuuggguuuuucauuaccauggcaugggAGAACCGGAACGAACUUUUUGgccaacccaa
.((((((((((((((((((((.(((.((((((((..(........)..)))))))).))).))))))))))))))))))))

Structure
a                    a   g        au acc 
 uuggguuggccagaaaguuc uuu gguuuuuc  u   a
 |||||||||||||||||||| ||| ||||||||  |    
 aacccaaccgGUUUUUCAAG AAG CCAAGAgg  a   u
-                    C   G        gu cgg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr10: 9099299-9099379 [-]

Database links

Mature bta-miR-2285v

Accession MIMAT0025579
Description Bos taurus bta-miR-2285v mature miRNA
Sequence 51 - AGAACCGGAACGAACUUUUUG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026