Stem-loop mmu-mir-6538

Accession

MI0022354

Symbol

MGI: Mir6538

Description

Mus musculus mmu-mir-6538 precursor miRNA

Literature search

5 open access papers mention mmu-mir-6538
(6 sentences)

Sequence

15226 reads, 128.0 reads per million, 122 experiments

ccgugcugccgggcggggacccCGCGGGCUCCGGGGCGGCGauggggacuaugcuccgggauuccgcugggugacggccgcguccuccuggccgcuugcacuuggggauc
((((((...(((.(((((((((.(((((.(((((((((.............)))))))))..))))).))))((((....)))).))))).)))...))))..)).....

Structure

-----  --    ugc   g     -------------    C     -C         GCGau 
     cc  gugc   cgg cgggg             accc GCGGG  UCCGGGGCG     g
     ||  ||||   ||| |||||             |||| |||||  |||||||||     g
     gg  cacg   gcc guccu             uggg cgccu  gggccucgu     g
cuagg  uu    uuc   g     ccugcgccggcag    u     ua         aucag 

Annotation confidence Not enough data

Genome context

12: 26464900-26465009 [-]

Mature mmu-miR-6538-5p

• Accession: MIMAT0025583
• Description: Mus musculus mmu-miR-6538-5p mature miRNA
• Sequence: 23 - CGCGGGCUCCGGGGCGGCG - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20605486
   Regulation of microRNA expression and abundance during lymphopoiesis
   "Kuchen S, Resch W, Yamane A, Kuo N, Li Z, Chakraborty T, Wei L, Laurence A, Yasuda T, Peng S, Hu-Li J, Lu K, Dubois W, Kitamura Y, Charles N, Sun HW, Muljo S, Schwartzberg PL, Paul WE, O'Shea J, Rajewsky K, Casellas R"
   "Immunity (2010) 32:828-839