Stem-loop mmu-mir-6539

Accession

MI0022355

Symbol

MGI: Mir6539

Description

Mus musculus mmu-mir-6539 precursor miRNA

Literature search

1 open access papers mention mmu-mir-6539
(2 sentences)

Sequence

1959 reads, 8 reads per million, 52 experiments

acacccucccccaggacaguaaaGCACAGUGAUGAACUCUGAGGGCUuuucacuuccucucggaguugcugguugcucacugggucugugaaugugaauccaugugggca
..((..(((....)))..))..(((.((((....(((((((((((...........))))))))))))))))))((((((((((((.........).))))).)))))).

Structure

--------------acacccucccccaggacaguaa   A    GAUG           CUuu 
                                    aGC CAGU    AACUCUGAGGG    u
                                    ||| ||||    |||||||||||    c
                                    uug gucg    uugaggcucuc    a
acggguguaccuaaguguaagugucugggucacucg   -    ----           cuuc 

Annotation confidence Not enough data

Genome context

chr14: 67859636-67859745 [-]

Mature mmu-miR-6539

• Accession: MIMAT0025584
• Description: Mus musculus mmu-miR-6539 mature miRNA
• Sequence: 24 - GCACAGUGAUGAACUCUGAGGGCU - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20605486
   Regulation of microRNA expression and abundance during lymphopoiesis
   "Kuchen S, Resch W, Yamane A, Kuo N, Li Z, Chakraborty T, Wei L, Laurence A, Yasuda T, Peng S, Hu-Li J, Lu K, Dubois W, Kitamura Y, Charles N, Sun HW, Muljo S, Schwartzberg PL, Paul WE, O'Shea J, Rajewsky K, Casellas R"
   "Immunity (2010) 32:828-839