Stem-loop mmu-mir-6942

Accession

MI0022789

Symbol

MGI: Mir6942

Description

Mus musculus mmu-mir-6942 precursor miRNA

Sequence

156 reads, 6 reads per million, 41 experiments

gggccUAGGAGGAGGGGAACAUUUGCaacuauaguggcUUAUGGUUCUCUCCACCUCUCAg
(((...(((.((((((((.(((..((.((....)).))..))).)))))))).))))))..

Structure

--   ccU   A        A   UU  a  u 
  ggg   AGG GGAGGGGA CAU  GC ac a
  |||   ||| |||||||| |||  || ||  
  CUC   UCC CCUCUCUU GUA  cg ug u
gA   ---   A        G   UU  g  a 

Annotation confidence Not enough data

Genome context

chr13: 21396578-21396638 [-]

Mature mmu-miR-6942-5p

• Accession: MIMAT0027784
• Description: Mus musculus mmu-miR-6942-5p mature miRNA
• Sequence: 6 - UAGGAGGAGGGGAACAUUUGC - 26
• Evidence: experimental ; meta-analysis [1]

Mature mmu-miR-6942-3p

• Accession: MIMAT0027785
• Description: Mus musculus mmu-miR-6942-3p mature miRNA
• Sequence: 39 - UUAUGGUUCUCUCCACCUCUCA - 60
• Evidence: experimental ; meta-analysis [1]

References

1. PubMed ID: 22955976
   Discovery of hundreds of mirtrons in mouse and human small RNA data
   "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
   "Genome Res (2012) 22:1634-1645