Stem-loop mmu-mir-6946

Accession

MI0022793

Symbol

MGI: Mir6946

Description

Mus musculus mmu-mir-6946 precursor miRNA

Sequence

196 reads, 1 reads per million, 59 experiments

aaaagAAAAGGGAGAGAAAGAAAUGCaaggugggcaaagcuauuugacaUUUCUUCUCUUCCCUUUCAG
....((((.(((((((((.((((((..((((((......))))))..))))))))))))))).))))..

Structure

aaaa    A         A      Ca      gc 
    gAAA GGGAGAGAA GAAAUG  aggugg  a
    |||| ||||||||| ||||||  ||||||   
    CUUU CCUUCUCUU CUUUac  uuuauc  a
--GA    C         -      ag      ga 

Annotation confidence Not enough data

Genome context

chr14: 20690635-20690703 [+]

Mature mmu-miR-6946-5p

• Accession: MIMAT0027792
• Description: Mus musculus mmu-miR-6946-5p mature miRNA
• Sequence: 6 - AAAAGGGAGAGAAAGAAAUGC - 26
• Evidence: experimental ; meta-analysis [1]

Mature mmu-miR-6946-3p

• Accession: MIMAT0027793
• Description: Mus musculus mmu-miR-6946-3p mature miRNA
• Sequence: 50 - UUUCUUCUCUUCCCUUUCAG - 69
• Evidence: experimental ; meta-analysis [1]

References

1. PubMed ID: 22955976
   Discovery of hundreds of mirtrons in mouse and human small RNA data
   "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
   "Genome Res (2012) 22:1634-1645