Stem-loop mmu-mir-6970

Accession

MI0022818

Symbol

MGI: Mir6970

Description

Mus musculus mmu-mir-6970 precursor miRNA

Literature search

1 open access papers mention mmu-mir-6970
(2 sentences)

Sequence

290 reads, 20 reads per million, 59 experiments

GUAAGUUCAGGGCUGGGAGCAGAGAcugggccugugcgaggucUCACGCCACCCACCCUGUGCUcag
...(((.(((((.((((.((.((((((..((....))..))))))..))..))))))))).)))...

Structure

GUA   U     C    -A  -A      gg  c 
   AGU CAGGG UGGG  GC  GAGAcu  gc u
   ||| ||||| ||||  ||  ||||||  ||  
   UCG GUCCC ACCC  CG  CUcugg  cg g
gac   U     -    AC  CA      ag  u 

Annotation confidence High

Genome context

chr17: 34845101-34845167 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-6970

Mature mmu-miR-6970-5p

• Accession: MIMAT0027842
• Description: Mus musculus mmu-miR-6970-5p mature miRNA
• Sequence: 1 - GUAAGUUCAGGGCUGGGAGCAGAGA - 25
• Evidence: experimental ; meta-analysis [1]

Mature mmu-miR-6970-3p

• Accession: MIMAT0027843
• Description: Mus musculus mmu-miR-6970-3p mature miRNA
• Sequence: 44 - UCACGCCACCCACCCUGUGCU - 64
• Evidence: experimental ; meta-analysis [1]

References

1. PubMed ID: 22955976
   Discovery of hundreds of mirtrons in mouse and human small RNA data
   "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
   "Genome Res (2012) 22:1634-1645