miRBase entry: mdm-MIR156y

Stem-loop mdm-MIR156y


Accession
MI0022995
Description
Malus domestica mdm-MIR156y precursor miRNA

Literature search
14 open access papers mention mdm-MIR156y
(299 sentences)

Sequence

ugcUGACAGAAGAUAGAGAGCACagaugaggaaaugcaagaacaaggcagcaucuccauccuuugugcucucuauucuucugucaaca
...(((((((((((((((((((((((.(((((.((((............)))).))).)).))))))))))))).))))))))))...

Structure
ugc          -             u  -   a    aagaa 
   UGACAGAAGA UAGAGAGCACaga ga gga augc     c
   |||||||||| ||||||||||||| || ||| ||||      
   acugucuucu aucucucguguuu cu ccu uacg     a
aca          u             c  a   c    acgga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mdm-miR156y

Accession MIMAT0025891
Description Malus domestica mdm-miR156y mature miRNA
Sequence 4 - UGACAGAAGAUAGAGAGCAC - 23
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47