Stem-loop mdm-MIR156ab

Accession

MI0022998

Description

Malus domestica mdm-MIR156ab precursor miRNA

Literature search

14 open access papers mention mdm-MIR156ab
(299 sentences)

Sequence

aggaguggggaacugggagagagaaagagcagggagugaugauacauugUUGACAGAAGAUAGAGAGCACagauggaugacuugcaauugacuaugcaucucacuccuuugugcucucuaugcuucugucaucaccucguuauaucuagcuuccuugccucucuccacacccgugcaccu
(((.(((.((...((((((((((.....((((((((((((((.....((.(((((((((((((((((((((((.((((((..((((........))))..))).))))))))))))))))).))))))))).))..)))))))........))))))))))))))).)).)).))).)))

Structure

   a   g  aac  -        aaaga       --------       uacau  U         -              u   -   cu    auu 
agg gug gg   ug ggagagag     gcaggga        gugauga     ug UGACAGAAG AUAGAGAGCACaga gga uga  ugca   g
||| ||| ||   || ||||||||     |||||||        |||||||     || ||||||||| |||||||||||||| ||| |||  ||||    
ucc cgu cc   ac ccucucuc     cguuccu        uauugcu     ac acugucuuc uaucucucguguuu ccu acu  acgu   a
   a   g  --c  a        -----       ucgaucua       ---cc  u         g              -   c   cu    auc 

Annotation confidence Not enough data

Genome context

MDC002621.233: 15612-15791 [+]

Mature mdm-miR156ab

• Accession: MIMAT0025894
• Description: Malus domestica mdm-miR156ab mature miRNA
• Sequence: 50 - UUGACAGAAGAUAGAGAGCAC - 70
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47