Stem-loop mdm-MIR156ac

Accession

MI0022999

Description

Malus domestica mdm-MIR156ac precursor miRNA

Literature search

14 open access papers mention mdm-MIR156ac
(299 sentences)

Sequence

caaucucuaaucauauuauaguauuaaauuuaggguaaggacuagggaacugggagagagaaagagcagggaguggugauacguugUUGACAGAAGAUAGAGAGCACagauggaugacuugcaauggacuaugcaucucacuccuuugugcucucuaugcuucugucaucaccuagcuauauccagcuucccugccccucccccacaccccugcaccucccauauuaaucuaauucauaaaaugauuauuugauug
(((((..(((((((.((((.(.((((.(((..(((..(((..(((((...((((.(.(((...(.(((((((((((..(((.((((.(((((((((((((((((((((((.((((((..((((........))))..))).))))))))))))))))).))))))))).))....)))))..)))..))))))))).))))))))...)))))..)))))).....))).)))).))))).)))))))...)))))

Structure

     -uc       a    a u    a   ---ua   ua   ac     aac    a a   aaa a        --   ug   c  ----  U         -              u   -   cu    aug 
caauc   uaaucau uuau g auua auu     ggg  agg  uaggg   uggg g gag   g gcagggag  ugg  aua gu    ug UGACAGAAG AUAGAGAGCACaga gga uga  ugca   g
|||||   ||||||| |||| | |||| |||     |||  |||  |||||   |||| | |||   | ||||||||  |||  ||| ||    || ||||||||| |||||||||||||| ||| |||  ||||    
guuag   auuagua aaua c uaau uaa     ccc  ucc  guccc   accc c cuc   c cgucccuu  acc  uau cg    ac acugucuuc uaucucucguguuu ccu acu  acgu   a
     uuu       a    - u    c   uuaua   --   ac     cac    - -   --c -        cg   ua   -  aucc  u         g              -   c   cu    auc 

Annotation confidence Not enough data

Genome context

MDC002441.399: 5371-5626 [-]

Mature mdm-miR156ac

• Accession: MIMAT0025895
• Description: Malus domestica mdm-miR156ac mature miRNA
• Sequence: 87 - UUGACAGAAGAUAGAGAGCAC - 107
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47