Stem-loop mdm-MIR156ad

Accession

MI0023000

Description

Malus domestica mdm-MIR156ad precursor miRNA

Literature search

14 open access papers mention mdm-MIR156ad
(294 sentences)

Sequence

57 reads, 38.0 reads per million, 15 experiments

gguuuggaaagaaggUGACAGAAGAAAGUGAGCACacgugguucuuuucuugcaugaauccaugucagaagcucuauguguucauucucuaucugucaccuaccauccuuaacc
((((.(((..(.(((((((((((((.((((((((((..(((..(((((...(((((....))))).)))))..))))))))))))).))).)))))))))).)..)))..))))

Structure

    -u   aa a          -   A          cg   uu     cuu     a 
gguu  gga  g aggUGACAGA AGA AGUGAGCACa  ugg  cuuuu   gcaug a
||||  |||  | |||||||||| ||| ||||||||||  |||  |||||   |||||  
ccaa  ccu  c uccacugucu ucu uuacuugugu  auc  gaaga   uguac u
    uu   ac a          a   c          --   uc     --c     c 

Annotation confidence Not enough data

Genome context

MDC013721.399: 9376-9489 [+]

Mature mdm-miR156ad-5p

• Accession: MIMAT0025896
• Description: Malus domestica mdm-miR156ad-5p mature miRNA
• Sequence: 16 - UGACAGAAGAAAGUGAGCAC - 35
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47