Stem-loop mdm-MIR166d

Accession

MI0023020

Description

Malus domestica mdm-MIR166d precursor miRNA

Literature search

7 open access papers mention mdm-MIR166d
(35 sentences)

Sequence

gguuauugaggggaauguuguuuggcucgaggccccuagcuagaucuaugaucuccaucucaauuggcgacaauuuuaaccaccaaccuuaaaaaauuuacaguaccaguugagaaagaucaucgauucuacguuuaacgaccUCGGACCAGGCUUCAUUCCCCccaauuacu
(((.((((.((((((((..((((((.(((((((....(((((((((.(((((((...((((((((((..((((((((...............))))))....)).)))))))))).))))))).)).)))).)))....).)))))).))))))..)))))))).)))).)))

Structure

   u    a        uu      c      - cccu   -    -  u       cca          cg  ----      aaccac 
ggu auug ggggaaug  guuugg ucgagg c    agc uaga uc augaucu   ucucaauugg  ac    aauuuu      c
||| |||| ||||||||  |||||| |||||| |    ||| |||| || |||||||   ||||||||||  ||    ||||||      a
uca uaac CCCCUUAC  CGGACC GGCUcc g    uug aucu ag uacuaga   agaguugacc  ug    uuaaaa      a
   u    c        UU      A      a caau   c    u  c       --a          -a  acau      aauucc 

Annotation confidence Not enough data

Genome context

MDC009861.462: 128-300 [+]

Mature mdm-miR166d

• Accession: MIMAT0025916
• Description: Malus domestica mdm-miR166d mature miRNA
• Sequence: 144 - UCGGACCAGGCUUCAUUCCCC - 164
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47