Stem-loop mdm-MIR167g

Accession

MI0023032

Description

Malus domestica mdm-MIR167g precursor miRNA

Literature search

11 open access papers mention mdm-MIR167g
(180 sentences)

Sequence

146398 reads, 10368.0 reads per million, 32 experiments

agaaugaccuagcuagagugcuugcuaucuuaucgugcaccuccaacaguUGAAGCUGCCAGCAUGAUCUAagcuaucuuuguauacaggaaaggcuauAGAUCAUGUGGUAGCUUCACCUGuugaaugaagcacgagaaaaacccuagauucacagcggucgaucu
(((.(((((..(((.((((.((..........((((((.....((((((.(((((((((((.(((((((((((((.((((.......))))..)))).)))))))))))))))))))).))))))......))))))..........))))))..)))))))).)))

Structure

   a     ua   -a    g  ugcuaucuua      -accuc      u           G         -    -a    ug 
aga ugacc  gcu  gagu cu          ucgugc      caacag UGAAGCUGCCA CAUGAUCUA agcu  ucuu  u
||| |||||  |||  |||| ||          ||||||      |||||| ||||||||||| ||||||||| ||||  ||||  a
ucu gcugg  cga  cuua ga          agcacg      guuGUC ACUUCGAUGGU GUACUAGAu ucgg  agga  u
   a     --   ca    -  ucccaaaaag      aaguaa      C           -         a    aa    ca 

Annotation confidence High

Genome context

MDC015374.161: 8805-8971 [-]

Mature mdm-miR167g-5p

• Accession: MIMAT0025928
• Description: Malus domestica mdm-miR167g-5p mature miRNA
• Sequence: 51 - UGAAGCUGCCAGCAUGAUCUA - 71
• Evidence: experimental ; miRNAseq [1]

Mature mdm-miR167g-3p

• Accession: MIMAT0056623
• Description: Malus domestica mdm-miR167g-3p mature miRNA
• Sequence: 100 - AGAUCAUGUGGUAGCUUCACCUG - 122
• Evidence: experimental ; unknown

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47