Stem-loop mdm-MIR167h

Accession

MI0023033

Description

Malus domestica mdm-MIR167h precursor miRNA

Literature search

11 open access papers mention mdm-MIR167h
(192 sentences)

Sequence

69813 reads, 4865.0 reads per million, 30 experiments

ucaugcacugguagcgguUGAAGCUGCCAGCAUGAUCUUAuaacucccwacuucguuuagggaagaucAGAUCAUCUGGCAGUUUCACCUGuuacugguagcauga
(((((((((((((((((.((((((((((((.(((((((.((...((((...........))))..)).))))))))))))))))))).))))))))))).))))))

Structure

      -           u            C       U  aac    wacu 
ucaugc acugguagcgg UGAAGCUGCCAG AUGAUCU Au   uccc    u
|||||| ||||||||||| |||||||||||| ||||||| ||   ||||    c
aguacg uggucauuGUC ACUUUGACGGUC UACUAGA ua   aggg    g
      a           C            -       c  -ga    auuu 

Annotation confidence High

Genome context

MDC015051.52: 15449-15554 [-]

Mature mdm-miR167h-5p

• Accession: MIMAT0025929
• Description: Malus domestica mdm-miR167h-5p mature miRNA
• Sequence: 19 - UGAAGCUGCCAGCAUGAUCUUA - 40
• Evidence: experimental ; miRNAseq [1]

Mature mdm-miR167h-3p

• Accession: MIMAT0056624
• Description: Malus domestica mdm-miR167h-3p mature miRNA
• Sequence: 69 - AGAUCAUCUGGCAGUUUCACCUG - 91
• Evidence: experimental ; unknown

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47