miRBase entry: mdm-MIR390b

Stem-loop mdm-MIR390b


Accession
MI0023074
Description
Malus domestica mdm-MIR390b precursor miRNA

Literature search
5 open access papers mention mdm-MIR390b
(40 sentences)

Sequence

guguggaagaaucuguuAAGCUCAGGAGGGAUAGCGCCauucucgguuugguuuaaccacauauagcgcuauccauccugaguuucauggcuucuucuuacac
(((((((((((.((((.((((((((((.(((((((((.((....((((......))))....)).))))))))).)))))))))).)))).)))))).)))))

Structure
     -      u    u          G         C  ucuc    ug 
gugug gaagaa cugu AAGCUCAGGA GGAUAGCGC au    gguu  g
||||| |||||| |||| |||||||||| ||||||||| ||    ||||   
cacau cuucuu ggua uuugaguccu ccuaucgcg ua    ccaa  u
     u      c    c          a         a  uaca    uu 


Annotation confidence Not enough data
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Genome context
MDC018186.206: 2564-2666 [-]

Database links

Mature mdm-miR390b

Accession MIMAT0025970
Description Malus domestica mdm-miR390b mature miRNA
Sequence 18 - AAGCUCAGGAGGGAUAGCGCC - 38
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47