Stem-loop mdm-MIR390d

Accession

MI0023076

Description

Malus domestica mdm-MIR390d precursor miRNA

Literature search

5 open access papers mention mdm-MIR390d
(40 sentences)

Sequence

aguaagggaggaucuguaAAGCUCAGGAGGGAUAGCGCCagaugaauuaaccaagauucuaacaauuaagcguuuauuuggucaucaucugargcuauccauccugaguuucauggcuucuucuuacu
(((((((.((((.((((.((((((((((.(((((((..(((((((....((((((.....(((........)))..))))))..)))))))..))))))).)))))))))).)))).)))))))))))

Structure

       g    u    a          G       GC       auua      auucu   aau 
aguaagg agga cugu AAGCUCAGGA GGAUAGC  Cagauga    accaag     aac   u
||||||| |||| |||| |||||||||| |||||||  |||||||    ||||||     |||    
ucauucu ucuu ggua uuugaguccu ccuaucg  gucuacu    ugguuu     uug   a
       -    c    c          a       ra       --ac      ---au   cga 

Annotation confidence Not enough data

Genome context

Unknown

Mature mdm-miR390d

• Accession: MIMAT0025972
• Description: Malus domestica mdm-miR390d mature miRNA
• Sequence: 19 - AAGCUCAGGAGGGAUAGCGCC - 39
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47