Stem-loop mdm-MIR390e

Accession

MI0023077

Description

Malus domestica mdm-MIR390e precursor miRNA

Literature search

5 open access papers mention mdm-MIR390e
(40 sentences)

Sequence

aguguggaagaaucuguuAAGCUCAGGAGGGAUAGCGCCauucucgguuugguuuaaccacguaucgcgcuauccaucuugggcuucauggcuucuucuuacu
((((.(((((((.((((.((((((((((.(((((((((.((....((((......))))....)).))))))))).)))))))))).)))).)))))))))))

Structure

    u       u    u          G         C  ucuc    ug 
agug ggaagaa cugu AAGCUCAGGA GGAUAGCGC au    gguu  g
|||| ||||||| |||| |||||||||| ||||||||| ||    ||||   
ucau ucuucuu ggua uucggguucu ccuaucgcg ua    ccaa  u
    -       c    c          a         c  ugca    uu 

Annotation confidence Not enough data

Genome context

MDC000913.252: 3959-4061 [+]

Mature mdm-miR390e

• Accession: MIMAT0025973
• Description: Malus domestica mdm-miR390e mature miRNA
• Sequence: 19 - AAGCUCAGGAGGGAUAGCGCC - 39
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47