Stem-loop mdm-MIR396g

Accession

MI0023099

Description

Malus domestica mdm-MIR396g precursor miRNA

Literature search

8 open access papers mention mdm-MIR396g
(37 sentences)

Sequence

gauccuccuugrgauuUUCCACGGCUUUCUUGAACUGugcagugugcagaagaguuaaacuggcagaaauuuuucaugcaguuacauaaacaguucaagaaagcugugaaaaaccacaggcaggauu
((((((.((((.(.((((.(((((((((((((((((((...(((((((((((((((...........)))))))).))))..)))....))))))))))))))))))).)))).).)))).))))))

Structure

      c    r a    C                   -gca   --    -        aaac 
gauccu cuug g uuUU CACGGCUUUCUUGAACUGu    gug  ugca gaagaguu    u
|||||| |||| | |||| |||||||||||||||||||    |||  |||| ||||||||    g
uuagga ggac c aaaa gugucgaaagaacuugaca    cau  acgu cuuuuuaa    g
      c    a c    a                   aaua   ug    a        agac 

Annotation confidence Not enough data

Genome context

Unknown

Mature mdm-miR396g

• Accession: MIMAT0025995
• Description: Malus domestica mdm-miR396g mature miRNA
• Sequence: 17 - UUCCACGGCUUUCUUGAACUG - 37
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47