Stem-loop mdm-MIR399c

Accession

MI0023107

Description

Malus domestica mdm-MIR399c precursor miRNA

Literature search

6 open access papers mention mdm-MIR399c
(8 sentences)

Sequence

ugaauaacagugnmauucuccuuuggcagaagucauucuggugcauauacucuugaguacuaucgcuggaurcauauauaugcuuucUGCCAAAGGAGAAUUGCCCUGcaauuca
(((((..(((.(..((((((((((((((((((.((((((((((.(((((((....)))).)))))))))).........))).))))))))))))))))))..).)))..)))))

Structure

     aa   u nm                  u   ---------       c   -    c 
ugaau  cag g  auucuccuuuggcagaag cau         ucuggug aua uacu u
|||||  ||| |  |||||||||||||||||| |||         ||||||| ||| ||||  
acuua  GUC C  UAAGAGGAAACCGUcuuu gua         aggucgc uau auga u
     ac   C GU                  c   uauauacru       -   c    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature mdm-miR399c

• Accession: MIMAT0026003
• Description: Malus domestica mdm-miR399c mature miRNA
• Sequence: 88 - UGCCAAAGGAGAAUUGCCCUG - 108
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47