Stem-loop mdm-MIR408a

Accession

MI0023117

Description

Malus domestica mdm-MIR408a precursor miRNA

Literature search

4 open access papers mention mdm-MIR408a
(17 sentences)

Sequence

ggaaagagaguuaauaagacagggaagagguagagcauggauggaguucucaagagcaaaauagagcucuugugacucuacucAUGCACUGCCUCUUCCCUGGCuuugccucccucuccuucc
((((.(((((.....(((.((((((((((((((.((((((.(((((((..(((((((........))))))).))))))).)))))).)))))))))))))).))).......))))).))))

Structure

    a     --uuaau   a              a      a       cu       aaa 
ggaa gagag       aag cagggaagagguag gcaugg uggaguu  caagagc   a
|||| |||||       ||| |||||||||||||| |||||| |||||||  |||||||    
ccuu cucuc       uuC GUCCCUUCUCCGUC CGUAcu aucucag  guucucg   u
    c     ccuccgu   G              A      c       -u       aga 

Annotation confidence Not enough data

Genome context

MDC006505.260: 3714-3836 [-]

Mature mdm-miR408a

• Accession: MIMAT0026013
• Description: Malus domestica mdm-miR408a mature miRNA
• Sequence: 84 - AUGCACUGCCUCUUCCCUGGC - 104
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47