miRBase entry: mdm-MIR3627b

Stem-loop mdm-MIR3627b


Accession
MI0023121
Description
Malus domestica mdm-MIR3627b precursor miRNA

Literature search
4 open access papers mention mdm-MIR3627b
(9 sentences)

Sequence

ggagauuuauguUCGCAGGAGAGAUGGCACUAauugugcuacaacuacaagcaauuguugccaucuuucccgugaccaaaaagcucu
((((.(((.((.((((.((((((((((((.(((((((.............))))))).)))))))))))).)))).)).))).))))

Structure
    a   a  u    A            C       gcuac 
ggag uuu ug UCGC GGAGAGAUGGCA UAauugu     a
|||| ||| || |||| |||||||||||| |||||||     a
ucuc aaa ac agug ccuuucuaccgu guuaacg     c
    g   a  c    c            u       aacau 


Annotation confidence Not enough data
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Genome context
MDC010881.251: 3172-3258 [+]

Database links

Mature mdm-miR3627b

Accession MIMAT0026017
Description Malus domestica mdm-miR3627b mature miRNA
Sequence 13 - UCGCAGGAGAGAUGGCACUA - 32
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47