Stem-loop mdm-MIR391

Accession

MI0023123

Description

Malus domestica mdm-MIR391 precursor miRNA

Literature search

4 open access papers mention mdm-MIR391
(4 sentences)

Sequence

20238 reads, 1357.0 reads per million, 26 experiments

gggagguucgcUACGCAGGAGAGAUGACGCCGacagucauguucuuaguauuaggauuagaaCGACGGCGUCAUCUCUCCUGCauaggaaaccuugc
(.((((((..(((.((((((((((((((((((...((..((.(((((....))))).))..))..)))))))))))))))))).)))..)))))).)

Structure

 g      cg   C                  aca  ca  u     g 
g gagguu  cUA GCAGGAGAGAUGACGCCG   gu  ug ucuua u
| ||||||  ||| ||||||||||||||||||   ||  || |||||  
c uuccaa  gau CGUCCUCUCUACUGCGGC   Ca  au aggau a
 g      ag   a                  -AG  ag  u     u 

Annotation confidence Low

Genome context

MDC009976.353: 25894-25990 [-]

Mature mdm-miR391-5p

• Accession: MIMAT0026019
• Description: Malus domestica mdm-miR391-5p mature miRNA
• Sequence: 12 - UACGCAGGAGAGAUGACGCCG - 32
• Evidence: experimental ; miRNAseq [1]

Mature mdm-miR391-3p

• Accession: MIMAT0056694
• Description: Malus domestica mdm-miR391-3p mature miRNA
• Sequence: 63 - CGACGGCGUCAUCUCUCCUGC - 83
• Evidence: experimental ; unknown

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47