Stem-loop mdm-MIR482b

Accession

MI0023126

Description

Malus domestica mdm-MIR482b precursor miRNA

Literature search

6 open access papers mention mdm-MIR482b
(34 sentences)

Sequence

138852 reads, 6740.0 reads per million, 28 experiments

aggaaguuguuggAAUGGAAGGGUAGGAAAGAAGaaacuucucuuguauguuccaaauucaagagauaaaauuUCUUUCCUAUCCCUCCCAUUCCuuckauuuucu
(((((((.(..(((((((.(((((((((((((((.....(((((((.((.......)).))))))).....))))))))))).)))).)))))))..).)))))))

Structure

       u uu       A    -           aaacu       u  gu 
aggaagu g  ggAAUGG AGGG UAGGAAAGAAG     ucucuug au  u
||||||| |  ||||||| |||| |||||||||||     ||||||| ||  c
ucuuuua c  CCUUACC UCCC AUCCUUUCUuu     agagaac ua  c
       k uu       C    U           aaaau       u  aa 

Annotation confidence High

Genome context

Unknown

Mature mdm-miR482b-5p

• Accession: MIMAT0056696
• Description: Malus domestica mdm-miR482b-5p mature miRNA
• Sequence: 14 - AAUGGAAGGGUAGGAAAGAAG - 34
• Evidence: experimental ; unknown

Mature mdm-miR482b-3p

• Accession: MIMAT0026022
• Description: Malus domestica mdm-miR482b-3p mature miRNA
• Sequence: 74 - UCUUUCCUAUCCCUCCCAUUCC - 95
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47