Stem-loop mdm-MIR535b

Accession

MI0023129

Description

Malus domestica mdm-MIR535b precursor miRNA

Literature search

5 open access papers mention mdm-MIR535b
(11 sentences)

Sequence

gauguugugUGACAAGGAGAGAGAGCACGCuugucaucacccaugaacggaucaugguuguuuacgggcgugcucucucuucuugucauacgguc
....((((((((((((((((((((((((((((((...((.((((((.....)))))).))...))))))))))))))))))))))))))))))..

Structure

gaug                              cau  c      a 
    uugugUGACAAGGAGAGAGAGCACGCuugu   ca ccauga c
    ||||||||||||||||||||||||||||||   || |||||| g
    ggcauacuguucuucucucucgugcgggca   gu gguacu g
--cu                              uuu  u      a 

Annotation confidence Not enough data

Genome context

MDC005729.245: 16577-16671 [-]

Mature mdm-miR535b

• Accession: MIMAT0026025
• Description: Malus domestica mdm-miR535b mature miRNA
• Sequence: 10 - UGACAAGGAGAGAGAGCACGC - 30
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47