Stem-loop mdm-MIR7124a

Accession

MI0023158

Description

Malus domestica mdm-MIR7124a precursor miRNA

Literature search

4 open access papers mention mdm-MIR7124a
(5 sentences)

Sequence

4243 reads, 288.0 reads per million, 27 experiments

gacaCACCAAUAUCAACUUUAUUUGuucauuaauacuuauaaagucauuacacuagaauuuucuuugaaagaaaauucuaguguauugacuuuauaaguauuaauggcuuugguauuaauuaaugaacaAAUAAAGUUGAUAUUGGUGUGUc
(((((((((((((((((((((((((((((((((((((((((((((((.(((((((((((((((((...))))))))))))))))).)))))))))))))))(((((.(...).)))))..))))))))))))))))))))))))))))))))

Structure

                                -------------------               u                 u 
gacaCACCAAUAUCAACUUUAUUUGuucauua                   auacuuauaaaguca uacacuagaauuuucuu  
||||||||||||||||||||||||||||||||                   ||||||||||||||| ||||||||||||||||| g
cUGUGUGGUUAUAGUUGAAAUAAacaaguaau                   uaugaauauuucagu augugaucuuaaaagaa  
                                uaauuaugguuucgguaau               u                 a 

Annotation confidence High

Genome context

MDC001716.95: 7472-7623 [+]

Mature mdm-miR7124a-5p

• Accession: MIMAT0026054
• Description: Malus domestica mdm-miR7124a-5p mature miRNA
• Sequence: 5 - CACCAAUAUCAACUUUAUUUG - 25
• Evidence: experimental ; miRNAseq [1]

Mature mdm-miR7124a-3p

• Accession: MIMAT0056725
• Description: Malus domestica mdm-miR7124a-3p mature miRNA
• Sequence: 130 - AAUAAAGUUGAUAUUGGUGUGU - 151
• Evidence: experimental ; unknown

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47