Stem-loop mdm-MIR393e

Accession

MI0023166

Description

Malus domestica mdm-MIR393e precursor miRNA

Literature search

6 open access papers mention mdm-MIR393e
(31 sentences)

Sequence

gguggaggcuuccaaagggaucgcauugaucuaauugaucagauaugucaaacaucauccgcauagacauaugguggguuauguuuucgucuguguagucggAUCAUGCGAUCCCUUCGGACGuuuccauc
(((((((((.(((.((((((((((((.(((((.((((..(((((.....((((((.(((((((((....))).)))))).))))))..)))))..)))).))))))))))))))))).))).)))))))))

Structure

         u   a            u     a    au     auguc      c      -   g 
gguggaggc ucc aagggaucgcau gaucu auug  cagau     aaacau auccgc aua a
||||||||| ||| |||||||||||| ||||| ||||  |||||     |||||| |||||| |||  
cuaccuuuG AGG UUCCCUAGCGUA CUAgg ugau  gucug     uuugua ugggug uau c
         C   C            -     c    gu     ---cu      u      g   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature mdm-miR393e

• Accession: MIMAT0026062
• Description: Malus domestica mdm-miR393e mature miRNA
• Sequence: 103 - AUCAUGCGAUCCCUUCGGACG - 123
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47