Stem-loop mdm-MIR7127b

Accession

MI0023169

Description

Malus domestica mdm-MIR7127b precursor miRNA

Literature search

1 open access papers mention mdm-MIR7127b
(1 sentences)

Sequence

959 reads, 72.0 reads per million, 27 experiments

gaaucauuggaAUACUCAUCGAAUUUGUCAUAguguuucaguuguguuauggaaccaauuuuucucccacucccauacmuaccacccaauuaauggcacagcuagaaCACUCUGACAAAUUGGAUGAGUwuuccaauaguc
.....(((((((.(((((((.(((((((((.(((((((.(((((((((((..........................................))))))))))).))))))).))))))))).))))))).)))))))....

Structure

gaauc       U       G         U       c           ggaaccaauuuuucucccac 
     auuggaA ACUCAUC AAUUUGUCA Aguguuu aguuguguuau                    u
     ||||||| ||||||| ||||||||| ||||||| |||||||||||                     
     uaaccuu UGAGUAG UUAAACAGU UCACaag ucgacacggua                    c
-cuga       w       G         C       a           auuaacccaccaumcauacc 

Annotation confidence Medium

Genome context

Unknown

Mature mdm-miR7127b-5p

• Accession: MIMAT0026065
• Description: Malus domestica mdm-miR7127b-5p mature miRNA
• Sequence: 12 - AUACUCAUCGAAUUUGUCAUA - 32
• Evidence: experimental ; miRNAseq [1]

Mature mdm-miR7127b-3p

• Accession: MIMAT0056732
• Description: Malus domestica mdm-miR7127b-3p mature miRNA
• Sequence: 108 - CACUCUGACAAAUUGGAUGAGU - 129
• Evidence: experimental ; unknown

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47