Stem-loop mdm-MIR169e

Accession

MI0023171

Description

Malus domestica mdm-MIR169e precursor miRNA

Literature search

4 open access papers mention mdm-MIR169e
(9 sentences)

Sequence

gaguguauaacaUGAAGAGAAGAGCGUUGUUUGGuagccaaggaugacuugccugcumccucuccuaauucuaauccaauccaauccaagaggaguccuacguuguuggguuucccagcagcaggcaccaggcaggucuccuuuggcuaacuugacagccucuucuucucaugcuauacccuu
(((.(((((.(((((.((((((((.((((((.(((((((((((..((((((((((...((((((((........................)))))......(((((((((...))))))))))))...))))))))))..)))))))).))).)))))))))))))).))))).))))).)))

Structure

   u     a     A        C      U   -        au          cum   cuccuaauucuaauccaauccaauccaagaggaguccuac         u 
gag guaua caUGA GAGAAGAG GUUGUU GGu agccaagg  gacuugccug   ccu                                        guuguuggg  
||| ||||| ||||| |||||||| |||||| ||| ||||||||  ||||||||||   |||                                        ||||||||| u
uuc cauau guacu uucuucuc cgacag uca ucgguuuc  cuggacggac   gga                                        cgacgaccc  
   c     c     c        -      u   a        cu          cac   ----------------------------------------         u 

Annotation confidence Not enough data

Genome context

Unknown

Mature mdm-miR169e

• Accession: MIMAT0026067
• Description: Malus domestica mdm-miR169e mature miRNA
• Sequence: 13 - UGAAGAGAAGAGCGUUGUUUGG - 34
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47