Stem-loop ccr-let-7b

Accession

MI0023298

Description

Cyprinus carpio ccr-let-7b precursor miRNA

Literature search

5 open access papers mention ccr-let-7b
(28 sentences)

Sequence

1143594 reads, 4623.0 reads per million, 33 experiments

agggUGAGGUAGUAGGUUGUGUGGUUucaggguagugauuuugccccaucaggagauaaCUAUACAACCUACUGCCUUCCc
.(((.(((((((((((((((((((((((.((((((.....))))))........)).))))))))))))))))))))))))

Structure

a   U                     -  -------a      u 
 ggg GAGGUAGUAGGUUGUGUGGUU uc        ggguag g
 ||| ||||||||||||||||||||| ||        |||||| a
 cCC UUCCGUCAUCCAACAUAUCaa ag        cccguu u
-   -                     u  aggacuac      u 

Annotation confidence High

Genome context

Unknown

Mature ccr-let-7b-5p

• Accession: MIMAT0026190
• Description: Cyprinus carpio ccr-let-7b-5p mature miRNA
• Sequence: 5 - UGAGGUAGUAGGUUGUGUGGUU - 26
• Evidence: experimental ; Illumina [1]

Mature ccr-let-7b-3p

• Accession: MIMAT0058250
• Description: Cyprinus carpio ccr-let-7b-3p mature miRNA
• Sequence: 60 - CUAUACAACCUACUGCCUUCC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925