Stem-loop ccr-let-7g

Accession

MI0023299

Description

Cyprinus carpio ccr-let-7g precursor miRNA

Literature search

5 open access papers mention ccr-let-7g
(27 sentences)

Sequence

663968 reads, 2629.0 reads per million, 33 experiments

ugugggaUGAGGUAGUAGUUUGUAUAGUUuuaggaucacaccagaucugggagauaaCUAUACAGUCUACUGUCUUUCccacgguaa
(((((((.((((((((((.((((((((((...(((((......))))).......)))))))))).)))))))))))))))))....

Structure

----       U          U          ----uua     ac 
    uguggga GAGGUAGUAG UUGUAUAGUU       ggauc  a
    ||||||| |||||||||| ||||||||||       |||||   
    gcaccCU UUCUGUCAUC GACAUAUCaa       ucuag  c
aaug       -          U          uagaggg     ac 

Annotation confidence High

Genome context

Unknown

Mature ccr-let-7g-5p

• Accession: MIMAT0026191
• Description: Cyprinus carpio ccr-let-7g-5p mature miRNA
• Sequence: 8 - UGAGGUAGUAGUUUGUAUAGUU - 29
• Evidence: experimental ; Illumina [1]

Mature ccr-let-7g-3p

• Accession: MIMAT0058251
• Description: Cyprinus carpio ccr-let-7g-3p mature miRNA
• Sequence: 58 - CUAUACAGUCUACUGUCUUUC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925